Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LDB2O43679 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.01■□□□□ 0.47
LDB2O43679 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LDB2O43679 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LDB2O43679 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LDB2O43679 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LDB2O43679 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LDB2O43679 Z83836.1-201ENST00000624605 1642 ntBASIC18.01■□□□□ 0.47
LDB2O43679 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.01■□□□□ 0.47
LDB2O43679 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB2O43679 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LDB2O43679 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.01■□□□□ 0.47
LDB2O43679 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB2O43679 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LDB2O43679 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.01■□□□□ 0.47
LDB2O43679 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18■□□□□ 0.47
LDB2O43679 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18■□□□□ 0.47
LDB2O43679 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18■□□□□ 0.47
LDB2O43679 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LDB2O43679 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 DDT-203ENST00000403754 569 ntTSL 3 BASIC18■□□□□ 0.47
LDB2O43679 AL645929.1-201ENST00000420084 975 ntBASIC18■□□□□ 0.47
LDB2O43679 TSPY12P-201ENST00000421279 868 ntBASIC18■□□□□ 0.47
LDB2O43679 DDT-206ENST00000430101 573 ntTSL 2 BASIC18■□□□□ 0.47
LDB2O43679 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18■□□□□ 0.47
LDB2O43679 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18■□□□□ 0.47
LDB2O43679 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18■□□□□ 0.47
LDB2O43679 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18■□□□□ 0.47
LDB2O43679 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
LDB2O43679 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18■□□□□ 0.47
LDB2O43679 AC087388.1-201ENST00000571370 1112 ntBASIC18■□□□□ 0.47
LDB2O43679 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18■□□□□ 0.47
LDB2O43679 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18■□□□□ 0.47
LDB2O43679 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LDB2O43679 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.99■□□□□ 0.47
LDB2O43679 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
LDB2O43679 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LDB2O43679 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.99■□□□□ 0.47
LDB2O43679 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
LDB2O43679 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
LDB2O43679 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.99■□□□□ 0.47
LDB2O43679 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.99■□□□□ 0.47
LDB2O43679 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LDB2O43679 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.99■□□□□ 0.47
LDB2O43679 AL136038.3-201ENST00000561909 1096 ntBASIC17.99■□□□□ 0.47
LDB2O43679 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.99■□□□□ 0.47
LDB2O43679 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LDB2O43679 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LDB2O43679 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LDB2O43679 KRT8P47-201ENST00000604727 1398 ntBASIC17.99■□□□□ 0.47
LDB2O43679 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LDB2O43679 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDB2O43679 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
LDB2O43679 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB2O43679 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB2O43679 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.98■□□□□ 0.47
LDB2O43679 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.98■□□□□ 0.47
LDB2O43679 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.98■□□□□ 0.47
LDB2O43679 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.98■□□□□ 0.47
LDB2O43679 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LDB2O43679 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.98■□□□□ 0.47
LDB2O43679 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.98■□□□□ 0.47
LDB2O43679 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB2O43679 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.98■□□□□ 0.47
LDB2O43679 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.98■□□□□ 0.47
LDB2O43679 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDB2O43679 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms