Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.36■□□□□ 0.69
CEP290O15078 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CEP290O15078 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.36■□□□□ 0.69
CEP290O15078 PIN1P1-201ENST00000412108 996 ntBASIC19.36■□□□□ 0.69
CEP290O15078 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.36■□□□□ 0.69
CEP290O15078 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.36■□□□□ 0.69
CEP290O15078 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CEP290O15078 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.36■□□□□ 0.69
CEP290O15078 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.35■□□□□ 0.69
CEP290O15078 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 GPR53P-205ENST00000457298 1084 ntBASIC19.35■□□□□ 0.69
CEP290O15078 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 AC010460.3-201ENST00000511359 1579 ntBASIC19.35■□□□□ 0.69
CEP290O15078 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CEP290O15078 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.35■□□□□ 0.69
CEP290O15078 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.35■□□□□ 0.69
CEP290O15078 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.35■□□□□ 0.69
CEP290O15078 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.35■□□□□ 0.69
CEP290O15078 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.35■□□□□ 0.69
CEP290O15078 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.35■□□□□ 0.69
CEP290O15078 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.35■□□□□ 0.69
CEP290O15078 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CEP290O15078 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CEP290O15078 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.35■□□□□ 0.69
CEP290O15078 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 KLF2P3-201ENST00000451977 1087 ntBASIC19.35■□□□□ 0.69
CEP290O15078 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.35■□□□□ 0.69
CEP290O15078 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.35■□□□□ 0.69
CEP290O15078 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.35■□□□□ 0.69
CEP290O15078 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.35■□□□□ 0.69
CEP290O15078 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CEP290O15078 AC084346.2-201ENST00000607097 949 ntBASIC19.35■□□□□ 0.69
CEP290O15078 AC092919.2-201ENST00000623631 1645 ntBASIC19.35■□□□□ 0.69
CEP290O15078 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.35■□□□□ 0.69
CEP290O15078 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEP290O15078 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.35■□□□□ 0.69
CEP290O15078 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CEP290O15078 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.34■□□□□ 0.69
CEP290O15078 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CEP290O15078 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CEP290O15078 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.34■□□□□ 0.69
CEP290O15078 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CEP290O15078 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CEP290O15078 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CEP290O15078 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.34■□□□□ 0.69
CEP290O15078 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.34■□□□□ 0.69
CEP290O15078 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CEP290O15078 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CEP290O15078 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CEP290O15078 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.34■□□□□ 0.69
CEP290O15078 MIR149-201ENST00000384879 89 ntBASIC19.34■□□□□ 0.69
CEP290O15078 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.34■□□□□ 0.69
CEP290O15078 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CEP290O15078 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CEP290O15078 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.34■□□□□ 0.69
CEP290O15078 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CEP290O15078 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CEP290O15078 TCF3P1-201ENST00000423021 1937 ntBASIC19.34■□□□□ 0.69
CEP290O15078 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CEP290O15078 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CEP290O15078 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CEP290O15078 AC074386.1-202ENST00000463561 864 ntBASIC19.33■□□□□ 0.69
CEP290O15078 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.33■□□□□ 0.69
CEP290O15078 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.33■□□□□ 0.69
CEP290O15078 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CEP290O15078 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.33■□□□□ 0.69
CEP290O15078 MIR6805-201ENST00000615055 62 ntBASIC19.33■□□□□ 0.69
CEP290O15078 AC007064.4-201ENST00000637740 555 ntBASIC19.33■□□□□ 0.69
CEP290O15078 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CEP290O15078 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CEP290O15078 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.33■□□□□ 0.69
CEP290O15078 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CEP290O15078 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CEP290O15078 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CEP290O15078 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CEP290O15078 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.33■□□□□ 0.68
CEP290O15078 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.33■□□□□ 0.68
CEP290O15078 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.33■□□□□ 0.68
CEP290O15078 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.33■□□□□ 0.68
CEP290O15078 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CEP290O15078 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.33■□□□□ 0.68
CEP290O15078 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CEP290O15078 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CEP290O15078 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms