Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 AL671277.2-201ENST00000458060 996 ntBASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 AL391005.1-201ENST00000623953 2435 ntBASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.37■□□□□ 0.85
SPDYE4A6NLX3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 AL137246.1-201ENST00000607072 977 ntBASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 AC092953.2-201ENST00000608000 699 ntBASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 AL121956.5-201ENST00000625261 221 ntBASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPDYE4A6NLX3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 AC073592.3-201ENST00000625118 1834 ntBASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 AC009947.2-201ENST00000444014 672 ntBASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 TMF1P1-201ENST00000576058 373 ntBASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 AL023803.3-201ENST00000615559 522 ntBASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.35■□□□□ 0.85
SPDYE4A6NLX3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.34■□□□□ 0.85
SPDYE4A6NLX3 CA15P1-201ENST00000481698 905 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms