Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 TUBB3P1-201ENST00000405796 1332 ntBASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 MYLKP1-201ENST00000509077 1580 ntBASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM88BA6NKF7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 AC112191.1-201ENST00000523689 701 ntBASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 AC148477.5-201ENST00000625164 1645 ntBASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.78■□□□□ 0.92
TMEM88BA6NKF7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 PTCHD3P3-201ENST00000403073 906 ntBASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 NME2P1-201ENST00000426182 414 ntBASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 ADH5P3-201ENST00000433842 1137 ntBASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 AC005237.2-201ENST00000434368 219 ntBASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 KLF2P3-201ENST00000451977 1087 ntBASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 AL512356.2-201ENST00000546955 174 ntBASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM88BA6NKF7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.77■□□□□ 0.91
TMEM88BA6NKF7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
TMEM88BA6NKF7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.77■□□□□ 0.91
TMEM88BA6NKF7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM88BA6NKF7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
TMEM88BA6NKF7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM88BA6NKF7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM88BA6NKF7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 AC006116.8-202ENST00000587620 1550 ntBASIC20.76■□□□□ 0.91
TMEM88BA6NKF7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms