Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.4■□□□□ 0.06
TMEM235A6NFC5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 AL355802.2-201ENST00000402069 882 ntBASIC15.4■□□□□ 0.06
TMEM235A6NFC5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 AL353807.1-201ENST00000427475 662 ntBASIC15.4■□□□□ 0.06
TMEM235A6NFC5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM235A6NFC5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 LINC01126-201ENST00000623515 1646 ntBASIC15.39■□□□□ 0.05
TMEM235A6NFC5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 CROCCP2-202ENST00000412962 2773 ntBASIC15.39■□□□□ 0.05
TMEM235A6NFC5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM235A6NFC5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 AC036111.1-201ENST00000533973 1582 ntBASIC15.38■□□□□ 0.05
TMEM235A6NFC5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 MIR3180-5-201ENST00000583743 153 ntBASIC15.38■□□□□ 0.05
TMEM235A6NFC5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM235A6NFC5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms