Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
C13orf42A0A1B0GVH6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
C13orf42A0A1B0GVH6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 AC142381.4-202ENST00000563973 229 ntBASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C13orf42A0A1B0GVH6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 AL357033.4-201ENST00000617703 1807 ntBASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C13orf42A0A1B0GVH6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms