Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 FAM197Y1-201ENST00000421178 764 ntBASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 MFAP1P1-201ENST00000442257 1255 ntBASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 KRT18P6-201ENST00000555540 1265 ntBASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV5A0A0B4J249 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 AC011676.5-201ENST00000624864 2660 ntBASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 NKILA-202ENST00000614771 2598 ntBASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 AC128676.1-201ENST00000454392 318 ntBASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 MIR4674-201ENST00000582457 87 ntBASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 LINC00602-201ENST00000629776 2065 ntBASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 TNRC18P3-201ENST00000441896 2691 ntBASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV5A0A0B4J249 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 AC096733.2-201ENST00000609937 1394 ntBASIC14□□□□□ -0.17
TRAV5A0A0B4J249 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 FER1L4-210ENST00000615531 5998 ntBASIC14□□□□□ -0.17
TRAV5A0A0B4J249 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 RPPH1-201ENST00000516869 333 ntBASIC14□□□□□ -0.17
TRAV5A0A0B4J249 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 RARRES2P10-201ENST00000564312 460 ntBASIC14□□□□□ -0.17
TRAV5A0A0B4J249 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms