Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 DUSP5P1-201ENST00000441325 1139 ntBASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 AC090616.6-201ENST00000582640 721 ntBASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 AL353692.3-201ENST00000407031 1396 ntBASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL4A3BPQ9Y5P4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 REXO1L9P-201ENST00000604264 2108 ntBASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 DRAXINP1-201ENST00000437611 948 ntBASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 TPSP2-201ENST00000561760 610 ntBASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 AC093010.1-201ENST00000473625 1624 ntBASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL4A3BPQ9Y5P4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.82
COL4A3BPQ9Y5P4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL4A3BPQ9Y5P4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 AC113404.2-201ENST00000507884 177 ntBASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 IGHV3-41-201ENST00000613121 348 ntBASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 AC004263.2-201ENST00000617183 678 ntBASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL4A3BPQ9Y5P4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 AC068880.1-201ENST00000507289 2297 ntBASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 MIR3652-201ENST00000579335 131 ntBASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 AC012313.10-201ENST00000623509 926 ntBASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL4A3BPQ9Y5P4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.12■□□□□ 0.81
COL4A3BPQ9Y5P4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms