Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 REXO1L9P-201ENST00000604264 2108 ntBASIC19.01■□□□□ 0.63
CDH9Q9ULB4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH9Q9ULB4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19■□□□□ 0.63
CDH9Q9ULB4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDH9Q9ULB4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19■□□□□ 0.63
CDH9Q9ULB4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH9Q9ULB4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19■□□□□ 0.63
CDH9Q9ULB4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19■□□□□ 0.63
CDH9Q9ULB4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH9Q9ULB4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH9Q9ULB4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH9Q9ULB4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH9Q9ULB4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19■□□□□ 0.63
CDH9Q9ULB4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19■□□□□ 0.63
CDH9Q9ULB4 MIR5100-201ENST00000579544 119 ntBASIC19■□□□□ 0.63
CDH9Q9ULB4 RN7SL510P-201ENST00000581311 263 ntBASIC19■□□□□ 0.63
CDH9Q9ULB4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19■□□□□ 0.63
CDH9Q9ULB4 AC011467.2-201ENST00000598425 242 ntBASIC19■□□□□ 0.63
CDH9Q9ULB4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH9Q9ULB4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19■□□□□ 0.63
CDH9Q9ULB4 KRT8P47-201ENST00000604727 1398 ntBASIC19■□□□□ 0.63
CDH9Q9ULB4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH9Q9ULB4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDH9Q9ULB4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDH9Q9ULB4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CDH9Q9ULB4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19■□□□□ 0.63
CDH9Q9ULB4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDH9Q9ULB4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH9Q9ULB4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH9Q9ULB4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 RCN1P2-201ENST00000398357 915 ntBASIC18.99■□□□□ 0.63
CDH9Q9ULB4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 AL121894.2-201ENST00000602977 491 ntBASIC18.99■□□□□ 0.63
CDH9Q9ULB4 AL591684.3-201ENST00000605187 298 ntBASIC18.99■□□□□ 0.63
CDH9Q9ULB4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.99■□□□□ 0.63
CDH9Q9ULB4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH9Q9ULB4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH9Q9ULB4 AC004870.1-201ENST00000315132 882 ntBASIC18.98■□□□□ 0.63
CDH9Q9ULB4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms