Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 PTCHD3P3-201ENST00000403073 906 ntBASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 AC096633.1-201ENST00000422446 749 ntBASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 AL135744.1-201ENST00000565098 629 ntBASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 AC004233.3-201ENST00000607794 1269 ntBASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 AL512408.1-201ENST00000569378 2000 ntBASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIMBP3Q9UFD9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 SDHAP2-201ENST00000455183 2001 ntBASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 BCYRN1-201ENST00000418539 200 ntBASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 TSSK5P-201ENST00000423978 907 ntBASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 AC026150.2-201ENST00000564693 1156 ntBASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3Q9UFD9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC28.35■■■□□ 2.13
RIMBP3Q9UFD9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 AC241585.1-201ENST00000433527 519 ntBASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 AC119751.2-201ENST00000504529 210 ntBASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 NFYC-AS1-201ENST00000606277 1687 ntBASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RIMBP3Q9UFD9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 AC002056.1-201ENST00000395613 760 ntBASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 AC112492.5-201ENST00000421897 457 ntBASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 FAM8A2P-201ENST00000528813 1142 ntBASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 IRX1P1-201ENST00000438849 1838 ntBASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3Q9UFD9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 FAM86C2P-203ENST00000528684 1004 ntBASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 AC243562.1-201ENST00000560672 389 ntBASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 AC132938.5-201ENST00000624980 1813 ntBASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RIMBP3Q9UFD9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC28.32■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms