Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LRIT1Q9P2V4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 SCARNA2-201ENST00000458748 420 ntBASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 RNPS1P1-201ENST00000507437 918 ntBASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRIT1Q9P2V4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 IL9RP2-201ENST00000423948 1312 ntBASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 AP005117.1-201ENST00000584346 1413 ntBASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.37■□□□□ 0.37
LRIT1Q9P2V4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 AC132938.6-201ENST00000623828 1655 ntBASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 AL020996.1-203ENST00000536896 2307 ntBASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 ABCD1P5-201ENST00000445663 754 ntBASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.36■□□□□ 0.37
LRIT1Q9P2V4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms