Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.04■□□□□ 0.8
BLOC1S4Q9NUP1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 TSPY22P-201ENST00000427496 604 ntBASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 RN7SL606P-201ENST00000472779 293 ntBASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 GNAS-203ENST00000306120 1878 ntBASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BLOC1S4Q9NUP1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 MTCL1P1-201ENST00000446207 792 ntBASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 AC087388.1-201ENST00000571370 1112 ntBASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
BLOC1S4Q9NUP1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
BLOC1S4Q9NUP1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BLOC1S4Q9NUP1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
BLOC1S4Q9NUP1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
BLOC1S4Q9NUP1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
BLOC1S4Q9NUP1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.02■□□□□ 0.79
BLOC1S4Q9NUP1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.02■□□□□ 0.79
BLOC1S4Q9NUP1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 AL845331.1-201ENST00000424978 1190 ntBASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 AL445228.2-201ENST00000605589 952 ntBASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 AC010331.1-201ENST00000611423 582 ntBASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BLOC1S4Q9NUP1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 AC009949.1-201ENST00000623048 1830 ntBASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms