Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFYVE28Q9HCC9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 AL020989.1-201ENST00000422979 469 ntBASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 IGHV3-65-201ENST00000523210 341 ntBASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 AC027612.4-201ENST00000605371 583 ntBASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 AC008667.4-201ENST00000607370 168 ntBASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.48■□□□□ 0.87
ZFYVE28Q9HCC9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 TSEN15P1-201ENST00000423257 515 ntBASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 AL031432.2-201ENST00000566714 459 ntBASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 AL928711.1-201ENST00000570165 459 ntBASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 AC093028.1-201ENST00000622998 982 ntBASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 AC004790.2-201ENST00000623588 572 ntBASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.47■□□□□ 0.87
ZFYVE28Q9HCC9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 AC010460.3-201ENST00000511359 1579 ntBASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms