Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 AC144831.1-201ENST00000573312 2656 ntBASIC13.21□□□□□ -0.29
VAMP8Q9BV40 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 AC138969.2-201ENST00000532739 9932 ntBASIC13.21□□□□□ -0.29
VAMP8Q9BV40 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 MIR3181-201ENST00000578512 73 ntBASIC13.21□□□□□ -0.29
VAMP8Q9BV40 MYC-208ENST00000641036 567 ntBASIC13.21□□□□□ -0.29
VAMP8Q9BV40 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.21□□□□□ -0.29
VAMP8Q9BV40 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
VAMP8Q9BV40 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VAMP8Q9BV40 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VAMP8Q9BV40 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 OR2I1P-209ENST00000641730 5365 ntBASIC13.2□□□□□ -0.3
VAMP8Q9BV40 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 AC008556.1-201ENST00000610908 2040 ntBASIC13.2□□□□□ -0.3
VAMP8Q9BV40 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.2□□□□□ -0.3
VAMP8Q9BV40 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 AC137630.3-201ENST00000607245 391 ntBASIC13.19□□□□□ -0.3
VAMP8Q9BV40 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 AC093010.1-201ENST00000473625 1624 ntBASIC13.19□□□□□ -0.3
VAMP8Q9BV40 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
VAMP8Q9BV40 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms