Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 AL589182.2-201ENST00000619332 1049 ntBASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 AC099343.3-201ENST00000605834 2503 ntBASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 AL020996.1-203ENST00000536896 2307 ntBASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 MIR4469-201ENST00000583919 79 ntBASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 C20orf181-201ENST00000623918 480 ntBASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.59■□□□□ 0.57
NECTIN4Q96NY8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN4Q96NY8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 CRYGEP-201ENST00000412192 528 ntBASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 KRT18P2-201ENST00000447938 1258 ntBASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 AD001527.2-201ENST00000622994 785 ntBASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.58■□□□□ 0.56
NECTIN4Q96NY8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.57■□□□□ 0.56
NECTIN4Q96NY8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms