Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMD4Q96H15 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 CROCCP3-202ENST00000420820 1947 ntBASIC15.13■□□□□ 0.01
TIMD4Q96H15 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 POM121L3P-201ENST00000419331 1163 ntBASIC15.13■□□□□ 0.01
TIMD4Q96H15 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 FAAHP1-202ENST00000446499 1238 ntBASIC15.13■□□□□ 0.01
TIMD4Q96H15 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TIMD4Q96H15 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMD4Q96H15 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 NUS1P2-201ENST00000417358 873 ntBASIC15.12■□□□□ 0.01
TIMD4Q96H15 TSPY19P-201ENST00000418461 509 ntBASIC15.12■□□□□ 0.01
TIMD4Q96H15 IGHV3-47-201ENST00000425060 335 ntBASIC15.12■□□□□ 0.01
TIMD4Q96H15 TSPY18P-201ENST00000441642 509 ntBASIC15.12■□□□□ 0.01
TIMD4Q96H15 MTCL1P1-201ENST00000446207 792 ntBASIC15.12■□□□□ 0.01
TIMD4Q96H15 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 KRT16P4-201ENST00000453883 522 ntBASIC15.12■□□□□ 0.01
TIMD4Q96H15 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 KRT18P31-201ENST00000506277 1292 ntBASIC15.12■□□□□ 0.01
TIMD4Q96H15 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 ESPNP-201ENST00000270691 2015 ntBASIC15.12■□□□□ 0.01
TIMD4Q96H15 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TIMD4Q96H15 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMD4Q96H15 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms