Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SH3KBP1Q96B97 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 AC099343.3-201ENST00000605834 2503 ntBASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 CHCHD2P8-201ENST00000429873 447 ntBASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 NPAP1P7-201ENST00000613027 823 ntBASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 AL163051.1-201ENST00000569214 1512 ntBASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SH3KBP1Q96B97 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 KRT89P-201ENST00000620027 1478 ntBASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 AL390961.4-201ENST00000623958 2535 ntBASIC17.86■□□□□ 0.45
SH3KBP1Q96B97 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 KRT126P-201ENST00000549467 1181 ntBASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 AC090616.6-201ENST00000582640 721 ntBASIC17.85■□□□□ 0.45
SH3KBP1Q96B97 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms