Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 CRYGFP-201ENST00000418459 633 ntBASIC17.35■□□□□ 0.37
VPS33AQ96AX1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 KRT18P23-201ENST00000435622 1283 ntBASIC17.34■□□□□ 0.37
VPS33AQ96AX1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 AL135905.2-201ENST00000584934 1404 ntBASIC17.34■□□□□ 0.37
VPS33AQ96AX1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.34■□□□□ 0.37
VPS33AQ96AX1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
VPS33AQ96AX1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.33■□□□□ 0.37
VPS33AQ96AX1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS33AQ96AX1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VPS33AQ96AX1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS33AQ96AX1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS33AQ96AX1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VPS33AQ96AX1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
VPS33AQ96AX1 HOXB1-202ENST00000577092 1414 ntBASIC17.33■□□□□ 0.36
VPS33AQ96AX1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS33AQ96AX1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS33AQ96AX1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS33AQ96AX1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS33AQ96AX1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS33AQ96AX1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS33AQ96AX1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS33AQ96AX1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
VPS33AQ96AX1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VPS33AQ96AX1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms