Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.64■□□□□ 0.25
CNOT9Q92600 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.64■□□□□ 0.25
CNOT9Q92600 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CNOT9Q92600 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT9Q92600 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT9Q92600 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.64■□□□□ 0.25
CNOT9Q92600 AC132938.6-201ENST00000623828 1655 ntBASIC16.64■□□□□ 0.25
CNOT9Q92600 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT9Q92600 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CNOT9Q92600 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.64■□□□□ 0.25
CNOT9Q92600 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT9Q92600 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.64■□□□□ 0.25
CNOT9Q92600 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.64■□□□□ 0.25
CNOT9Q92600 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.64■□□□□ 0.25
CNOT9Q92600 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CNOT9Q92600 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CNOT9Q92600 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CNOT9Q92600 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT9Q92600 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT9Q92600 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT9Q92600 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CNOT9Q92600 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT9Q92600 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT9Q92600 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT9Q92600 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CNOT9Q92600 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CNOT9Q92600 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CNOT9Q92600 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT9Q92600 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.63■□□□□ 0.25
CNOT9Q92600 BX664615.1-201ENST00000443558 458 ntBASIC16.63■□□□□ 0.25
CNOT9Q92600 KRT18P57-201ENST00000443599 1254 ntBASIC16.63■□□□□ 0.25
CNOT9Q92600 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 YBX1P2-201ENST00000489612 999 ntBASIC16.63■□□□□ 0.25
CNOT9Q92600 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.63■□□□□ 0.25
CNOT9Q92600 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.63■□□□□ 0.25
CNOT9Q92600 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.63■□□□□ 0.25
CNOT9Q92600 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.63■□□□□ 0.25
CNOT9Q92600 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.63■□□□□ 0.25
CNOT9Q92600 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.63■□□□□ 0.25
CNOT9Q92600 AC079602.3-201ENST00000623931 403 ntBASIC16.63■□□□□ 0.25
CNOT9Q92600 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CNOT9Q92600 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CNOT9Q92600 AL031432.5-201ENST00000641059 760 ntBASIC16.63■□□□□ 0.25
CNOT9Q92600 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.63■□□□□ 0.25
CNOT9Q92600 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CNOT9Q92600 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.63■□□□□ 0.25
CNOT9Q92600 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CNOT9Q92600 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CNOT9Q92600 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CNOT9Q92600 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT9Q92600 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT9Q92600 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CNOT9Q92600 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.62■□□□□ 0.25
CNOT9Q92600 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.62■□□□□ 0.25
CNOT9Q92600 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.62■□□□□ 0.25
CNOT9Q92600 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CNOT9Q92600 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 AC117947.1-201ENST00000427448 529 ntBASIC16.62■□□□□ 0.25
CNOT9Q92600 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.62■□□□□ 0.25
CNOT9Q92600 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CNOT9Q92600 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT9Q92600 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CNOT9Q92600 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT9Q92600 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT9Q92600 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT9Q92600 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT9Q92600 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT9Q92600 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT9Q92600 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.61■□□□□ 0.25
CNOT9Q92600 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT9Q92600 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT9Q92600 SPDYE15P-201ENST00000424157 909 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms