Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.2□□□□□ -0.46
COPS9Q8WXC6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.2□□□□□ -0.46
COPS9Q8WXC6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
COPS9Q8WXC6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.2□□□□□ -0.46
COPS9Q8WXC6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COPS9Q8WXC6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
COPS9Q8WXC6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COPS9Q8WXC6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COPS9Q8WXC6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.2□□□□□ -0.46
COPS9Q8WXC6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 TSPY23P-201ENST00000440136 739 ntBASIC12.19□□□□□ -0.46
COPS9Q8WXC6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 AL136967.2-201ENST00000623968 743 ntBASIC12.19□□□□□ -0.46
COPS9Q8WXC6 PCDHA3-202ENST00000532566 4594 ntBASIC12.19□□□□□ -0.46
COPS9Q8WXC6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 KRT8P32-201ENST00000512863 1461 ntBASIC12.19□□□□□ -0.46
COPS9Q8WXC6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 LINC01126-201ENST00000623515 1646 ntBASIC12.19□□□□□ -0.46
COPS9Q8WXC6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COPS9Q8WXC6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COPS9Q8WXC6 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms