Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.26■□□□□ 0.19
RNF138Q8WVD3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 KRT18P56-201ENST00000507275 550 ntBASIC16.26■□□□□ 0.19
RNF138Q8WVD3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 TP73-AS1-210ENST00000637775 1455 ntBASIC16.26■□□□□ 0.19
RNF138Q8WVD3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF138Q8WVD3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 INTS4P1-201ENST00000438455 1935 ntBASIC16.25■□□□□ 0.19
RNF138Q8WVD3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 TSPY19P-201ENST00000418461 509 ntBASIC16.25■□□□□ 0.19
RNF138Q8WVD3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 TSPY18P-201ENST00000441642 509 ntBASIC16.25■□□□□ 0.19
RNF138Q8WVD3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RNF138Q8WVD3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 NOC2LP2-201ENST00000407594 1944 ntBASIC16.24■□□□□ 0.19
RNF138Q8WVD3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 AC005104.2-201ENST00000427818 678 ntBASIC16.24■□□□□ 0.19
RNF138Q8WVD3 DUSP5P1-201ENST00000441325 1139 ntBASIC16.24■□□□□ 0.19
RNF138Q8WVD3 MINOS1P3-201ENST00000457048 203 ntBASIC16.24■□□□□ 0.19
RNF138Q8WVD3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 AC099336.1-202ENST00000602961 463 ntBASIC16.24■□□□□ 0.19
RNF138Q8WVD3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.24■□□□□ 0.19
RNF138Q8WVD3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF138Q8WVD3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
RNF138Q8WVD3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF138Q8WVD3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RNF138Q8WVD3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF138Q8WVD3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF138Q8WVD3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RNF138Q8WVD3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF138Q8WVD3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF138Q8WVD3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF138Q8WVD3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms