Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 AP000997.3-201ENST00000623333 2250 ntBASIC18.28■□□□□ 0.52
PTCD2Q8WV60 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCD2Q8WV60 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTCD2Q8WV60 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.27■□□□□ 0.51
PTCD2Q8WV60 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.27■□□□□ 0.51
PTCD2Q8WV60 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.27■□□□□ 0.51
PTCD2Q8WV60 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTCD2Q8WV60 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.27■□□□□ 0.51
PTCD2Q8WV60 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTCD2Q8WV60 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 AL391807.1-203ENST00000604392 2365 ntBASIC18.25■□□□□ 0.51
PTCD2Q8WV60 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 AC022726.2-201ENST00000634673 547 ntBASIC18.25■□□□□ 0.51
PTCD2Q8WV60 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCD2Q8WV60 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms