Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 KRT8P50-201ENST00000562022 1438 ntBASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 PRORSD1P-202ENST00000563365 2154 ntBASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 LINC00265-3P-201ENST00000447588 903 ntBASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 TPSP2-201ENST00000561760 610 ntBASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 AC024563.2-201ENST00000603282 481 ntBASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLDND2Q8NHS1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDND2Q8NHS1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDND2Q8NHS1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDND2Q8NHS1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDND2Q8NHS1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLDND2Q8NHS1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLDND2Q8NHS1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLDND2Q8NHS1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLDND2Q8NHS1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 DRAXINP1-201ENST00000437611 948 ntBASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 AP000867.3-201ENST00000524675 377 ntBASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 GPR32P1-201ENST00000601788 811 ntBASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDND2Q8NHS1 AC012313.1-201ENST00000593393 3059 ntBASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 AC026396.1-201ENST00000419388 421 ntBASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 TOB2P1-201ENST00000469761 992 ntBASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDND2Q8NHS1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms