Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
RTL9Q8NET4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
RTL9Q8NET4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 PMPCAP1-201ENST00000508114 1576 ntBASIC22.11■■□□□ 1.13
RTL9Q8NET4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.11■■□□□ 1.13
RTL9Q8NET4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 MIR1233-2-201ENST00000408138 82 ntBASIC22.11■■□□□ 1.13
RTL9Q8NET4 MIR1233-1-201ENST00000408722 82 ntBASIC22.11■■□□□ 1.13
RTL9Q8NET4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.11■■□□□ 1.13
RTL9Q8NET4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTL9Q8NET4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 AC092183.1-201ENST00000469884 875 ntBASIC22.1■■□□□ 1.13
RTL9Q8NET4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.1■■□□□ 1.13
RTL9Q8NET4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTL9Q8NET4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.09■■□□□ 1.13
RTL9Q8NET4 PMS2P7-201ENST00000506558 1336 ntBASIC22.09■■□□□ 1.13
RTL9Q8NET4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RTL9Q8NET4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RTL9Q8NET4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTL9Q8NET4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTL9Q8NET4 AC079776.2-201ENST00000641154 1609 ntBASIC22.09■■□□□ 1.13
RTL9Q8NET4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTL9Q8NET4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RTL9Q8NET4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.09■■□□□ 1.13
RTL9Q8NET4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTL9Q8NET4 COX10-202ENST00000429152 875 ntTSL 2 BASIC22.09■■□□□ 1.13
RTL9Q8NET4 IGHV3-22-201ENST00000520721 359 ntBASIC22.09■■□□□ 1.13
RTL9Q8NET4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTL9Q8NET4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.09■■□□□ 1.13
RTL9Q8NET4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.09■■□□□ 1.13
RTL9Q8NET4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.09■■□□□ 1.13
RTL9Q8NET4 AC116407.3-201ENST00000623905 1129 ntBASIC22.09■■□□□ 1.13
RTL9Q8NET4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTL9Q8NET4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.09■■□□□ 1.13
RTL9Q8NET4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTL9Q8NET4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTL9Q8NET4 AC018445.3-201ENST00000624177 1945 ntBASIC22.09■■□□□ 1.13
RTL9Q8NET4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTL9Q8NET4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTL9Q8NET4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTL9Q8NET4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.08■■□□□ 1.13
RTL9Q8NET4 AC022898.2-201ENST00000616822 1312 ntBASIC22.08■■□□□ 1.13
RTL9Q8NET4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTL9Q8NET4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTL9Q8NET4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTL9Q8NET4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTL9Q8NET4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
RTL9Q8NET4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
RTL9Q8NET4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTL9Q8NET4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTL9Q8NET4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.08■■□□□ 1.13
RTL9Q8NET4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
RTL9Q8NET4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC22.08■■□□□ 1.12
RTL9Q8NET4 BX842568.4-201ENST00000421222 227 ntBASIC22.08■■□□□ 1.12
RTL9Q8NET4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTL9Q8NET4 AC145285.3-201ENST00000564603 959 ntBASIC22.08■■□□□ 1.12
RTL9Q8NET4 NKAPP1-205ENST00000585790 367 ntBASIC22.08■■□□□ 1.12
RTL9Q8NET4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.08■■□□□ 1.12
RTL9Q8NET4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTL9Q8NET4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTL9Q8NET4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTL9Q8NET4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
RTL9Q8NET4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTL9Q8NET4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms