Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 AC005332.8-201ENST00000622750 2735 ntBASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 IGHGP-201ENST00000390555 1178 ntBASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 KRT18P65-201ENST00000439811 1286 ntBASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRFBP1Q8NEF9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SRFBP1Q8NEF9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SRFBP1Q8NEF9 LINC00602-201ENST00000629776 2065 ntBASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 NOC2LP1-202ENST00000452600 2235 ntBASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 GPR32P1-201ENST00000601788 811 ntBASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 LINC00167-201ENST00000530583 1419 ntBASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 AC020916.1-201ENST00000587762 1774 ntBASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.2■□□□□ 0.34
SRFBP1Q8NEF9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRFBP1Q8NEF9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms