Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 TSPY12P-201ENST00000421279 868 ntBASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 DRAXINP1-201ENST00000437611 948 ntBASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 AC113404.2-201ENST00000507884 177 ntBASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 TPSP2-201ENST00000561760 610 ntBASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 AC093503.3-201ENST00000624917 2352 ntBASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRIM48Q8IWZ4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 AC104819.1-201ENST00000504587 486 ntBASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 KRT126P-201ENST00000549467 1181 ntBASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 AC011840.4-201ENST00000578471 627 ntBASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 Z69720.1-201ENST00000601483 472 ntBASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 AC012313.10-201ENST00000623509 926 ntBASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM48Q8IWZ4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms