Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN4BQ8IWT1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 AC026396.1-201ENST00000419388 421 ntBASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 KRT16P4-201ENST00000453883 522 ntBASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 AC112698.1-201ENST00000510299 916 ntBASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCN4BQ8IWT1 AL138781.2-201ENST00000617896 1843 ntBASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 POM121L3P-201ENST00000419331 1163 ntBASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.97■□□□□ 0.63
SCN4BQ8IWT1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCN4BQ8IWT1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms