Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 LINC00602-201ENST00000629776 2065 ntBASIC17.94■□□□□ 0.46
NUDCD3Q8IVD9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 MESTP1-201ENST00000404287 994 ntBASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NUDCD3Q8IVD9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 AC073648.6-201ENST00000641589 218 ntBASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NUDCD3Q8IVD9 AC096733.2-201ENST00000609937 1394 ntBASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms