Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 MIR3687-2-201ENST00000577708 61 ntBASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 MIR3687-1-201ENST00000614492 61 ntBASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 PGM5P2-202ENST00000637225 1043 ntBASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 SIGLEC16-201ENST00000599858 1437 ntBASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS4Q8IUM7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 AC007967.2-201ENST00000432613 625 ntBASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 AC103564.2-201ENST00000432853 1299 ntBASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 AL139424.1-201ENST00000607572 797 ntBASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 AC005593.1-201ENST00000624894 515 ntBASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NPAS4Q8IUM7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 AC093010.1-201ENST00000473625 1624 ntBASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 KRT8P47-201ENST00000604727 1398 ntBASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 AL031598.1-201ENST00000561511 1773 ntBASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 SPDYE21P-201ENST00000413323 827 ntBASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 AC004832.2-201ENST00000426397 482 ntBASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 AC126763.1-201ENST00000552015 2118 ntBASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS4Q8IUM7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms