Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 PRYP5-201ENST00000451909 266 ntBASIC12.47□□□□□ -0.41
CSMD3Q7Z407 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 GPR89P-201ENST00000407924 1495 ntBASIC12.47□□□□□ -0.41
CSMD3Q7Z407 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 HLA-V-201ENST00000429037 534 ntBASIC12.47□□□□□ -0.41
CSMD3Q7Z407 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 KRT19P2-202ENST00000557173 1012 ntBASIC12.47□□□□□ -0.41
CSMD3Q7Z407 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 CEND1P1-201ENST00000451006 455 ntBASIC12.46□□□□□ -0.41
CSMD3Q7Z407 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 AL035252.4-201ENST00000624174 288 ntBASIC12.46□□□□□ -0.41
CSMD3Q7Z407 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.46□□□□□ -0.41
CSMD3Q7Z407 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD3Q7Z407 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD3Q7Z407 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD3Q7Z407 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.46□□□□□ -0.42
CSMD3Q7Z407 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD3Q7Z407 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.46□□□□□ -0.42
CSMD3Q7Z407 AP000344.2-201ENST00000512987 629 ntBASIC12.46□□□□□ -0.42
CSMD3Q7Z407 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
CSMD3Q7Z407 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 TSEN15P1-201ENST00000423257 515 ntBASIC12.45□□□□□ -0.42
CSMD3Q7Z407 UGT1A2P-201ENST00000454886 866 ntBASIC12.45□□□□□ -0.42
CSMD3Q7Z407 AC023141.5-201ENST00000458585 616 ntBASIC12.45□□□□□ -0.42
CSMD3Q7Z407 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 AL513210.1-201ENST00000629608 234 ntBASIC12.45□□□□□ -0.42
CSMD3Q7Z407 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CSMD3Q7Z407 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms