Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 AL157888.1-201ENST00000631930 593 ntBASIC16.63■□□□□ 0.25
ZNF550Q7Z398 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 AC026471.1-201ENST00000564629 3026 ntBASIC16.63■□□□□ 0.25
ZNF550Q7Z398 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF550Q7Z398 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 AP000997.3-201ENST00000623333 2250 ntBASIC16.62■□□□□ 0.25
ZNF550Q7Z398 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 FAM8A6P-201ENST00000407496 1135 ntBASIC16.62■□□□□ 0.25
ZNF550Q7Z398 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 AL441883.1-201ENST00000566170 1045 ntBASIC16.62■□□□□ 0.25
ZNF550Q7Z398 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.62■□□□□ 0.25
ZNF550Q7Z398 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF550Q7Z398 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.61■□□□□ 0.25
ZNF550Q7Z398 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 AL359075.1-203ENST00000462729 1002 ntBASIC16.61■□□□□ 0.25
ZNF550Q7Z398 DUTP2-201ENST00000519164 463 ntBASIC16.61■□□□□ 0.25
ZNF550Q7Z398 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 GCSHP2-201ENST00000560971 527 ntBASIC16.61■□□□□ 0.25
ZNF550Q7Z398 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF550Q7Z398 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms