Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHFQ7M4L6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHFQ7M4L6 AC097488.1-201ENST00000507834 756 ntBASIC16.33■□□□□ 0.2
SHFQ7M4L6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.33■□□□□ 0.2
SHFQ7M4L6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHFQ7M4L6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHFQ7M4L6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHFQ7M4L6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHFQ7M4L6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHFQ7M4L6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHFQ7M4L6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 AD000864.1-201ENST00000624076 2295 ntBASIC16.33■□□□□ 0.2
SHFQ7M4L6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
SHFQ7M4L6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 UBE2SP1-201ENST00000450587 669 ntBASIC16.32■□□□□ 0.2
SHFQ7M4L6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 AC142381.4-202ENST00000563973 229 ntBASIC16.32■□□□□ 0.2
SHFQ7M4L6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHFQ7M4L6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SHFQ7M4L6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 MIR3180-5-201ENST00000583743 153 ntBASIC16.31■□□□□ 0.2
SHFQ7M4L6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHFQ7M4L6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.31■□□□□ 0.2
SHFQ7M4L6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 AC012618.2-201ENST00000428058 849 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms