Protein–RNA interactions for Protein: Q5T700

LDLRAD1, Low-density lipoprotein receptor class A domain-containing protein 1, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD1Q5T700 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 TSEN15P1-201ENST00000423257 515 ntBASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 COX20P2-201ENST00000452636 358 ntBASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 AC096734.2-201ENST00000562054 433 ntBASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 AL049757.1-201ENST00000616842 1596 ntBASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.74■□□□□ 0.91
LDLRAD1Q5T700 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 AC005082.1-201ENST00000413042 2259 ntBASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 RHOQP3-201ENST00000437982 621 ntBASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 BCRP1-201ENST00000444246 691 ntBASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 ACTG1P14-201ENST00000446382 1122 ntBASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 AP000344.2-201ENST00000512987 629 ntBASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 AC010654.1-201ENST00000615722 808 ntBASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.73■□□□□ 0.91
LDLRAD1Q5T700 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 GMCL1P1-201ENST00000463439 1581 ntBASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 KRT19P2-202ENST00000557173 1012 ntBASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 AC010507.1-201ENST00000633895 436 ntBASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD1Q5T700 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD1Q5T700 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms