Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.47■□□□□ 0.23
RBM48Q5RL73 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBM48Q5RL73 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 KRT8P50-201ENST00000562022 1438 ntBASIC16.46■□□□□ 0.23
RBM48Q5RL73 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 HLA-J-201ENST00000462773 1622 ntBASIC16.46■□□□□ 0.23
RBM48Q5RL73 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 MIR564-202ENST00000385049 94 ntBASIC16.46■□□□□ 0.23
RBM48Q5RL73 AC004911.1-201ENST00000416316 871 ntBASIC16.46■□□□□ 0.23
RBM48Q5RL73 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 SDHAP2-201ENST00000455183 2001 ntBASIC16.46■□□□□ 0.23
RBM48Q5RL73 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 AC092368.3-202ENST00000574180 1591 ntBASIC16.46■□□□□ 0.23
RBM48Q5RL73 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RBM48Q5RL73 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
RBM48Q5RL73 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.46■□□□□ 0.22
RBM48Q5RL73 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.46■□□□□ 0.22
RBM48Q5RL73 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
RBM48Q5RL73 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.46■□□□□ 0.22
RBM48Q5RL73 LINC00304-203ENST00000565008 1864 ntBASIC16.46■□□□□ 0.22
RBM48Q5RL73 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
RBM48Q5RL73 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 LINC01126-201ENST00000623515 1646 ntBASIC16.45■□□□□ 0.22
RBM48Q5RL73 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.45■□□□□ 0.22
RBM48Q5RL73 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RBM48Q5RL73 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RBM48Q5RL73 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBM48Q5RL73 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBM48Q5RL73 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RBM48Q5RL73 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RBM48Q5RL73 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 DUSP5P2-201ENST00000426873 1033 ntBASIC16.44■□□□□ 0.22
RBM48Q5RL73 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.44■□□□□ 0.22
RBM48Q5RL73 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms