Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 FAM86EP-206ENST00000510506 987 ntBASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 AC009154.2-201ENST00000621177 724 ntBASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 KRT8P47-201ENST00000604727 1398 ntBASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 AC006116.8-202ENST00000587620 1550 ntBASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 AC022898.2-201ENST00000616822 1312 ntBASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN20Q4JDL3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 AC087388.1-201ENST00000571370 1112 ntBASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 AC011498.5-201ENST00000592027 486 ntBASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN20Q4JDL3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms