Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.4■□□□□ 0.38
HMGCS1Q01581 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCS1Q01581 NEK4P2-201ENST00000580004 1012 ntBASIC17.4■□□□□ 0.38
HMGCS1Q01581 MIR3917-201ENST00000580971 93 ntBASIC17.4■□□□□ 0.38
HMGCS1Q01581 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCS1Q01581 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
HMGCS1Q01581 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HMGCS1Q01581 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCS1Q01581 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMGCS1Q01581 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCS1Q01581 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMGCS1Q01581 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
HMGCS1Q01581 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.39■□□□□ 0.38
HMGCS1Q01581 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 AC100803.2-201ENST00000562459 1963 ntBASIC17.39■□□□□ 0.37
HMGCS1Q01581 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 ECEL1P3-201ENST00000427961 737 ntBASIC17.39■□□□□ 0.37
HMGCS1Q01581 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 AL157888.1-201ENST00000631930 593 ntBASIC17.39■□□□□ 0.37
HMGCS1Q01581 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 AC092865.7-201ENST00000641832 219 ntBASIC17.39■□□□□ 0.37
HMGCS1Q01581 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGCS1Q01581 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCS1Q01581 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HMGCS1Q01581 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCS1Q01581 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 AC106820.2-201ENST00000563775 3264 ntBASIC17.37■□□□□ 0.37
HMGCS1Q01581 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 AC211429.1-201ENST00000415277 523 ntBASIC17.37■□□□□ 0.37
HMGCS1Q01581 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms