Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 USP39-204ENST00000409766 2033 ntTSL 2 BASIC12.93□□□□□ -0.34
PRKDCP78527 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
PRKDCP78527 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
PRKDCP78527 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.93□□□□□ -0.34
PRKDCP78527 MIR6787-201ENST00000616675 61 ntBASIC12.93□□□□□ -0.34
PRKDCP78527 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.93□□□□□ -0.34
PRKDCP78527 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
PRKDCP78527 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
PRKDCP78527 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
PRKDCP78527 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PRKDCP78527 SPTLC1P1-201ENST00000447199 261 ntBASIC12.93□□□□□ -0.34
PRKDCP78527 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PRKDCP78527 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PRKDCP78527 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.93□□□□□ -0.34
PRKDCP78527 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.93□□□□□ -0.34
PRKDCP78527 AL805961.1-202ENST00000641562 540 ntBASIC12.93□□□□□ -0.34
PRKDCP78527 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.92□□□□□ -0.34
PRKDCP78527 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.92□□□□□ -0.34
PRKDCP78527 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.92□□□□□ -0.34
PRKDCP78527 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 TREML5P-201ENST00000421694 576 ntBASIC12.92□□□□□ -0.34
PRKDCP78527 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 AC004890.2-204ENST00000481968 304 ntBASIC12.92□□□□□ -0.34
PRKDCP78527 KRT8P48-201ENST00000515599 1220 ntBASIC12.92□□□□□ -0.34
PRKDCP78527 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.92□□□□□ -0.34
PRKDCP78527 SLC25A39P2-201ENST00000537614 270 ntBASIC12.92□□□□□ -0.34
PRKDCP78527 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
PRKDCP78527 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.92□□□□□ -0.34
PRKDCP78527 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PRKDCP78527 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.92□□□□□ -0.34
PRKDCP78527 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.92□□□□□ -0.34
PRKDCP78527 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
PRKDCP78527 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.92□□□□□ -0.34
PRKDCP78527 AP001059.3-201ENST00000619053 235 ntBASIC12.92□□□□□ -0.34
PRKDCP78527 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PRKDCP78527 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PRKDCP78527 FP475955.4-201ENST00000623131 1990 ntBASIC12.92□□□□□ -0.34
PRKDCP78527 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PRKDCP78527 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.92□□□□□ -0.34
PRKDCP78527 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.92□□□□□ -0.34
PRKDCP78527 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.92□□□□□ -0.34
PRKDCP78527 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 GNAS-203ENST00000306120 1878 ntBASIC12.92□□□□□ -0.34
PRKDCP78527 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRKDCP78527 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.92□□□□□ -0.34
PRKDCP78527 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.92□□□□□ -0.34
PRKDCP78527 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.92□□□□□ -0.34
PRKDCP78527 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.92□□□□□ -0.34
PRKDCP78527 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PRKDCP78527 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.92□□□□□ -0.34
PRKDCP78527 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PRKDCP78527 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
PRKDCP78527 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.91□□□□□ -0.34
PRKDCP78527 AC132938.5-201ENST00000624980 1813 ntBASIC12.91□□□□□ -0.34
PRKDCP78527 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.91□□□□□ -0.34
PRKDCP78527 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC12.91□□□□□ -0.34
PRKDCP78527 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC12.91□□□□□ -0.34
PRKDCP78527 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PRKDCP78527 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.91□□□□□ -0.34
PRKDCP78527 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PRKDCP78527 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.91□□□□□ -0.34
PRKDCP78527 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.91□□□□□ -0.34
PRKDCP78527 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
PRKDCP78527 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PRKDCP78527 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.91□□□□□ -0.34
PRKDCP78527 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC12.9□□□□□ -0.34
PRKDCP78527 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PRKDCP78527 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms