Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MCCD1P59942 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCCD1P59942 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCCD1P59942 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCCD1P59942 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.28■□□□□ 0.68
MCCD1P59942 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.28■□□□□ 0.68
MCCD1P59942 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.28■□□□□ 0.68
MCCD1P59942 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.28■□□□□ 0.68
MCCD1P59942 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MCCD1P59942 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MCCD1P59942 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.28■□□□□ 0.68
MCCD1P59942 AL445228.2-201ENST00000605589 952 ntBASIC19.28■□□□□ 0.68
MCCD1P59942 AC124864.1-201ENST00000623408 392 ntBASIC19.28■□□□□ 0.68
MCCD1P59942 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MCCD1P59942 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.28■□□□□ 0.68
MCCD1P59942 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.28■□□□□ 0.68
MCCD1P59942 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MCCD1P59942 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCCD1P59942 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCCD1P59942 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MCCD1P59942 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.27■□□□□ 0.68
MCCD1P59942 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.27■□□□□ 0.68
MCCD1P59942 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
MCCD1P59942 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MCCD1P59942 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCCD1P59942 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.27■□□□□ 0.68
MCCD1P59942 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.27■□□□□ 0.68
MCCD1P59942 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.27■□□□□ 0.68
MCCD1P59942 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MCCD1P59942 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.27■□□□□ 0.68
MCCD1P59942 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MCCD1P59942 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.27■□□□□ 0.68
MCCD1P59942 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MCCD1P59942 BX276092.5-203ENST00000456199 560 ntBASIC19.27■□□□□ 0.68
MCCD1P59942 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MCCD1P59942 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.27■□□□□ 0.68
MCCD1P59942 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MCCD1P59942 IER3-202ENST00000376377 1350 ntBASIC19.27■□□□□ 0.68
MCCD1P59942 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MCCD1P59942 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
MCCD1P59942 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MCCD1P59942 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
MCCD1P59942 AC010460.3-201ENST00000511359 1579 ntBASIC19.27■□□□□ 0.67
MCCD1P59942 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MCCD1P59942 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.27■□□□□ 0.67
MCCD1P59942 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MCCD1P59942 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MCCD1P59942 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 BX276092.7-203ENST00000637198 1536 ntBASIC19.26■□□□□ 0.67
MCCD1P59942 HLA-J-201ENST00000462773 1622 ntBASIC19.26■□□□□ 0.67
MCCD1P59942 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.26■□□□□ 0.67
MCCD1P59942 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MCCD1P59942 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
MCCD1P59942 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.26■□□□□ 0.67
MCCD1P59942 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.26■□□□□ 0.67
MCCD1P59942 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
MCCD1P59942 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
MCCD1P59942 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.26■□□□□ 0.67
MCCD1P59942 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 AP005901.3-202ENST00000581653 237 ntBASIC19.26■□□□□ 0.67
MCCD1P59942 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.26■□□□□ 0.67
MCCD1P59942 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
MCCD1P59942 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.26■□□□□ 0.67
MCCD1P59942 AC010331.1-201ENST00000611423 582 ntBASIC19.26■□□□□ 0.67
MCCD1P59942 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MCCD1P59942 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
MCCD1P59942 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.26■□□□□ 0.67
MCCD1P59942 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
MCCD1P59942 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
MCCD1P59942 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MCCD1P59942 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MCCD1P59942 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MCCD1P59942 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.25■□□□□ 0.67
MCCD1P59942 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MCCD1P59942 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.25■□□□□ 0.67
MCCD1P59942 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MCCD1P59942 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MCCD1P59942 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MCCD1P59942 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.25■□□□□ 0.67
MCCD1P59942 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MCCD1P59942 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MCCD1P59942 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MCCD1P59942 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.25■□□□□ 0.67
MCCD1P59942 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.25■□□□□ 0.67
MCCD1P59942 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.25■□□□□ 0.67
MCCD1P59942 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MCCD1P59942 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MCCD1P59942 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.25■□□□□ 0.67
MCCD1P59942 TSSC2-201ENST00000450217 709 ntBASIC19.25■□□□□ 0.67
MCCD1P59942 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.25■□□□□ 0.67
MCCD1P59942 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms