Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 TSPY19P-201ENST00000418461 509 ntBASIC20.61■□□□□ 0.89
CHMP4BP1P59074 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 TSPY18P-201ENST00000441642 509 ntBASIC20.61■□□□□ 0.89
CHMP4BP1P59074 FAAHP1-202ENST00000446499 1238 ntBASIC20.61■□□□□ 0.89
CHMP4BP1P59074 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 AC079776.4-201ENST00000511039 504 ntBASIC20.61■□□□□ 0.89
CHMP4BP1P59074 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 GPR32P1-201ENST00000601788 811 ntBASIC20.61■□□□□ 0.89
CHMP4BP1P59074 AL390719.2-201ENST00000606993 987 ntBASIC20.61■□□□□ 0.89
CHMP4BP1P59074 AL031008.1-201ENST00000619963 541 ntBASIC20.61■□□□□ 0.89
CHMP4BP1P59074 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.61■□□□□ 0.89
CHMP4BP1P59074 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 AC068880.1-201ENST00000507289 2297 ntBASIC20.61■□□□□ 0.89
CHMP4BP1P59074 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.6■□□□□ 0.89
CHMP4BP1P59074 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 KRT18P31-201ENST00000506277 1292 ntBASIC20.6■□□□□ 0.89
CHMP4BP1P59074 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
CHMP4BP1P59074 Z98044.1-201ENST00000632503 1764 ntBASIC20.59■□□□□ 0.89
CHMP4BP1P59074 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 AC079781.3-201ENST00000449110 356 ntBASIC20.59■□□□□ 0.89
CHMP4BP1P59074 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 AC024563.2-201ENST00000603282 481 ntBASIC20.59■□□□□ 0.89
CHMP4BP1P59074 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP4BP1P59074 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 AL357033.4-201ENST00000617703 1807 ntBASIC20.58■□□□□ 0.89
CHMP4BP1P59074 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 AP000347.1-202ENST00000435868 847 ntBASIC20.58■□□□□ 0.89
CHMP4BP1P59074 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP4BP1P59074 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms