Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 YBX1P2-201ENST00000489612 999 ntBASIC16.14■□□□□ 0.17
CLRN1P58418 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.14■□□□□ 0.17
CLRN1P58418 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.14■□□□□ 0.17
CLRN1P58418 AC011558.1-201ENST00000623459 338 ntBASIC16.14■□□□□ 0.17
CLRN1P58418 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.14■□□□□ 0.17
CLRN1P58418 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLRN1P58418 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.14■□□□□ 0.17
CLRN1P58418 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLRN1P58418 AL133373.2-201ENST00000623187 2828 ntBASIC16.14■□□□□ 0.17
CLRN1P58418 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLRN1P58418 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLRN1P58418 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLRN1P58418 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLRN1P58418 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.13■□□□□ 0.17
CLRN1P58418 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.13■□□□□ 0.17
CLRN1P58418 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
CLRN1P58418 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.13■□□□□ 0.17
CLRN1P58418 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.13■□□□□ 0.17
CLRN1P58418 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLRN1P58418 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLRN1P58418 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLRN1P58418 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLRN1P58418 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.13■□□□□ 0.17
CLRN1P58418 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLRN1P58418 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLRN1P58418 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLRN1P58418 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.12■□□□□ 0.17
CLRN1P58418 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLRN1P58418 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 AP000997.3-201ENST00000623333 2250 ntBASIC16.12■□□□□ 0.17
CLRN1P58418 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.12■□□□□ 0.17
CLRN1P58418 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.12■□□□□ 0.17
CLRN1P58418 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.12■□□□□ 0.17
CLRN1P58418 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 AC117947.1-201ENST00000427448 529 ntBASIC16.12■□□□□ 0.17
CLRN1P58418 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.12■□□□□ 0.17
CLRN1P58418 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.12■□□□□ 0.17
CLRN1P58418 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.12■□□□□ 0.17
CLRN1P58418 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLRN1P58418 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.12■□□□□ 0.17
CLRN1P58418 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CLRN1P58418 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLRN1P58418 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLRN1P58418 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.12■□□□□ 0.17
CLRN1P58418 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.12■□□□□ 0.17
CLRN1P58418 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLRN1P58418 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLRN1P58418 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLRN1P58418 AC073508.3-201ENST00000619697 1419 ntBASIC16.11■□□□□ 0.17
CLRN1P58418 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLRN1P58418 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms