Protein–RNA interactions for Protein: P56817

BACE1, Beta-secretase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1P56817 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BACE1P56817 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BACE1P56817 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BACE1P56817 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BACE1P56817 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.7■□□□□ 0.9
BACE1P56817 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.7■□□□□ 0.9
BACE1P56817 UPF3AP3-201ENST00000420996 769 ntBASIC20.7■□□□□ 0.9
BACE1P56817 AC103564.2-201ENST00000432853 1299 ntBASIC20.7■□□□□ 0.9
BACE1P56817 AC009947.1-201ENST00000444350 727 ntBASIC20.7■□□□□ 0.9
BACE1P56817 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
BACE1P56817 AC055717.3-201ENST00000622967 595 ntBASIC20.7■□□□□ 0.9
BACE1P56817 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
BACE1P56817 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BACE1P56817 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BACE1P56817 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BACE1P56817 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
BACE1P56817 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.7■□□□□ 0.9
BACE1P56817 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.7■□□□□ 0.9
BACE1P56817 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.7■□□□□ 0.9
BACE1P56817 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BACE1P56817 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
BACE1P56817 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BACE1P56817 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BACE1P56817 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.7■□□□□ 0.9
BACE1P56817 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BACE1P56817 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
BACE1P56817 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BACE1P56817 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BACE1P56817 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BACE1P56817 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BACE1P56817 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
BACE1P56817 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BACE1P56817 SPDYE21P-201ENST00000413323 827 ntBASIC20.69■□□□□ 0.9
BACE1P56817 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.69■□□□□ 0.9
BACE1P56817 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.69■□□□□ 0.9
BACE1P56817 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.69■□□□□ 0.9
BACE1P56817 AC040169.1-201ENST00000565382 521 ntBASIC20.69■□□□□ 0.9
BACE1P56817 AL139424.1-201ENST00000607572 797 ntBASIC20.69■□□□□ 0.9
BACE1P56817 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.69■□□□□ 0.9
BACE1P56817 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BACE1P56817 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BACE1P56817 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BACE1P56817 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BACE1P56817 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.69■□□□□ 0.9
BACE1P56817 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
BACE1P56817 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
BACE1P56817 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.68■□□□□ 0.9
BACE1P56817 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.68■□□□□ 0.9
BACE1P56817 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.68■□□□□ 0.9
BACE1P56817 COX5BP2-201ENST00000392354 334 ntBASIC20.68■□□□□ 0.9
BACE1P56817 AC073621.1-201ENST00000392730 636 ntBASIC20.68■□□□□ 0.9
BACE1P56817 RPSAP43-201ENST00000402237 625 ntBASIC20.68■□□□□ 0.9
BACE1P56817 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.68■□□□□ 0.9
BACE1P56817 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.68■□□□□ 0.9
BACE1P56817 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.68■□□□□ 0.9
BACE1P56817 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.68■□□□□ 0.9
BACE1P56817 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.68■□□□□ 0.9
BACE1P56817 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.68■□□□□ 0.9
BACE1P56817 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.68■□□□□ 0.9
BACE1P56817 AC006557.2-201ENST00000592985 1240 ntBASIC20.68■□□□□ 0.9
BACE1P56817 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.68■□□□□ 0.9
BACE1P56817 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 AC073592.3-201ENST00000625118 1834 ntBASIC20.68■□□□□ 0.9
BACE1P56817 AC022898.2-201ENST00000616822 1312 ntBASIC20.68■□□□□ 0.9
BACE1P56817 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.68■□□□□ 0.9
BACE1P56817 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
BACE1P56817 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BACE1P56817 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BACE1P56817 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
BACE1P56817 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.67■□□□□ 0.9
BACE1P56817 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BACE1P56817 YBX2P1-201ENST00000394192 760 ntBASIC20.67■□□□□ 0.9
BACE1P56817 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BACE1P56817 GPX1P2-201ENST00000429271 606 ntBASIC20.67■□□□□ 0.9
BACE1P56817 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.67■□□□□ 0.9
BACE1P56817 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.67■□□□□ 0.9
BACE1P56817 RNA5SP416-201ENST00000516838 111 ntBASIC20.67■□□□□ 0.9
BACE1P56817 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BACE1P56817 AC010327.4-202ENST00000591484 748 ntBASIC20.67■□□□□ 0.9
BACE1P56817 AL691403.2-201ENST00000618460 490 ntBASIC20.67■□□□□ 0.9
BACE1P56817 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.67■□□□□ 0.9
BACE1P56817 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BACE1P56817 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BACE1P56817 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BACE1P56817 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BACE1P56817 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BACE1P56817 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BACE1P56817 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BACE1P56817 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BACE1P56817 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms