Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLCN3P51790 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.76■□□□□ 0.75
CLCN3P51790 FAM197Y8-203ENST00000450145 560 ntBASIC19.76■□□□□ 0.75
CLCN3P51790 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.76■□□□□ 0.75
CLCN3P51790 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.76■□□□□ 0.75
CLCN3P51790 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.76■□□□□ 0.75
CLCN3P51790 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLCN3P51790 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.76■□□□□ 0.75
CLCN3P51790 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CLCN3P51790 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLCN3P51790 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN3P51790 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLCN3P51790 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.75■□□□□ 0.75
CLCN3P51790 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN3P51790 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CLCN3P51790 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 AL138781.2-201ENST00000617896 1843 ntBASIC19.75■□□□□ 0.75
CLCN3P51790 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN3P51790 AL662844.1-201ENST00000546340 181 ntBASIC19.75■□□□□ 0.75
CLCN3P51790 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.75■□□□□ 0.75
CLCN3P51790 AL355877.3-201ENST00000622820 899 ntBASIC19.75■□□□□ 0.75
CLCN3P51790 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.75■□□□□ 0.75
CLCN3P51790 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CLCN3P51790 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.75■□□□□ 0.75
CLCN3P51790 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN3P51790 HLA-A-201ENST00000376802 1334 ntBASIC19.75■□□□□ 0.75
CLCN3P51790 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCN3P51790 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.74■□□□□ 0.75
CLCN3P51790 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLCN3P51790 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCN3P51790 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.74■□□□□ 0.75
CLCN3P51790 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLCN3P51790 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CLCN3P51790 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 AC007967.3-201ENST00000434308 558 ntBASIC19.74■□□□□ 0.75
CLCN3P51790 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CLCN3P51790 FGFR3P6-201ENST00000457012 610 ntBASIC19.74■□□□□ 0.75
CLCN3P51790 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLCN3P51790 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.74■□□□□ 0.75
CLCN3P51790 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.74■□□□□ 0.75
CLCN3P51790 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.74■□□□□ 0.75
CLCN3P51790 MTDHP3-201ENST00000594186 672 ntBASIC19.74■□□□□ 0.75
CLCN3P51790 AC148477.8-201ENST00000624298 468 ntBASIC19.74■□□□□ 0.75
CLCN3P51790 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCN3P51790 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCN3P51790 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLCN3P51790 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCN3P51790 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN3P51790 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CLCN3P51790 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLCN3P51790 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLCN3P51790 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms