Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC068587.9-201ENST00000641814 219 ntBASIC21.02■□□□□ 0.96
MRE11P49959 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
MRE11P49959 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC21.02■□□□□ 0.96
MRE11P49959 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MRE11P49959 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MRE11P49959 KRT8P45-201ENST00000414328 1447 ntBASIC21.02■□□□□ 0.96
MRE11P49959 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
MRE11P49959 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
MRE11P49959 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.02■□□□□ 0.95
MRE11P49959 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC21.02■□□□□ 0.95
MRE11P49959 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.02■□□□□ 0.95
MRE11P49959 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MRE11P49959 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MRE11P49959 AC092368.3-202ENST00000574180 1591 ntBASIC21.02■□□□□ 0.95
MRE11P49959 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MRE11P49959 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
MRE11P49959 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
MRE11P49959 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.01■□□□□ 0.95
MRE11P49959 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
MRE11P49959 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.01■□□□□ 0.95
MRE11P49959 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.01■□□□□ 0.95
MRE11P49959 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
MRE11P49959 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC21.01■□□□□ 0.95
MRE11P49959 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
MRE11P49959 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
MRE11P49959 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.01■□□□□ 0.95
MRE11P49959 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.01■□□□□ 0.95
MRE11P49959 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.01■□□□□ 0.95
MRE11P49959 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MRE11P49959 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.01■□□□□ 0.95
MRE11P49959 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21■□□□□ 0.95
MRE11P49959 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRE11P49959 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MRE11P49959 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRE11P49959 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21■□□□□ 0.95
MRE11P49959 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
MRE11P49959 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21■□□□□ 0.95
MRE11P49959 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MRE11P49959 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MRE11P49959 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21■□□□□ 0.95
MRE11P49959 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
MRE11P49959 SOX15-203ENST00000570788 1093 ntBASIC21■□□□□ 0.95
MRE11P49959 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21■□□□□ 0.95
MRE11P49959 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21■□□□□ 0.95
MRE11P49959 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
MRE11P49959 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
MRE11P49959 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21■□□□□ 0.95
MRE11P49959 AC105020.1-201ENST00000435356 2205 ntBASIC21■□□□□ 0.95
MRE11P49959 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
MRE11P49959 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
MRE11P49959 AL096828.2-201ENST00000567259 1965 ntBASIC20.99■□□□□ 0.95
MRE11P49959 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.99■□□□□ 0.95
MRE11P49959 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
MRE11P49959 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.99■□□□□ 0.95
MRE11P49959 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
MRE11P49959 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.99■□□□□ 0.95
MRE11P49959 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
MRE11P49959 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.99■□□□□ 0.95
MRE11P49959 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.99■□□□□ 0.95
MRE11P49959 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.99■□□□□ 0.95
MRE11P49959 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.99■□□□□ 0.95
MRE11P49959 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
MRE11P49959 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.99■□□□□ 0.95
MRE11P49959 AL596257.1-201ENST00000641463 2694 ntBASIC20.99■□□□□ 0.95
MRE11P49959 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MRE11P49959 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.99■□□□□ 0.95
MRE11P49959 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms