Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.12■□□□□ 0.49
MDH1P40925 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.12■□□□□ 0.49
MDH1P40925 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.12■□□□□ 0.49
MDH1P40925 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.12■□□□□ 0.49
MDH1P40925 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.12■□□□□ 0.49
MDH1P40925 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.12■□□□□ 0.49
MDH1P40925 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.12■□□□□ 0.49
MDH1P40925 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.12■□□□□ 0.49
MDH1P40925 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.12■□□□□ 0.49
MDH1P40925 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.12■□□□□ 0.49
MDH1P40925 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MDH1P40925 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.11■□□□□ 0.49
MDH1P40925 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
MDH1P40925 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.11■□□□□ 0.49
MDH1P40925 AC006015.1-201ENST00000429970 570 ntBASIC18.11■□□□□ 0.49
MDH1P40925 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.11■□□□□ 0.49
MDH1P40925 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.11■□□□□ 0.49
MDH1P40925 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.11■□□□□ 0.49
MDH1P40925 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
MDH1P40925 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.11■□□□□ 0.49
MDH1P40925 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.11■□□□□ 0.49
MDH1P40925 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 HLA-J-201ENST00000462773 1622 ntBASIC18.11■□□□□ 0.49
MDH1P40925 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.11■□□□□ 0.49
MDH1P40925 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
MDH1P40925 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.11■□□□□ 0.49
MDH1P40925 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.11■□□□□ 0.49
MDH1P40925 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.11■□□□□ 0.49
MDH1P40925 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.11■□□□□ 0.49
MDH1P40925 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MDH1P40925 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MDH1P40925 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.1■□□□□ 0.49
MDH1P40925 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MDH1P40925 PCDHB17P-201ENST00000539533 2393 ntBASIC18.1■□□□□ 0.49
MDH1P40925 AC060834.1-201ENST00000443027 2032 ntBASIC18.1■□□□□ 0.49
MDH1P40925 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.1■□□□□ 0.49
MDH1P40925 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
MDH1P40925 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MDH1P40925 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MDH1P40925 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.1■□□□□ 0.49
MDH1P40925 AC092368.3-202ENST00000574180 1591 ntBASIC18.1■□□□□ 0.49
MDH1P40925 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MDH1P40925 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
MDH1P40925 MIR564-202ENST00000385049 94 ntBASIC18.1■□□□□ 0.49
MDH1P40925 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.1■□□□□ 0.49
MDH1P40925 AC034268.1-201ENST00000441047 882 ntBASIC18.1■□□□□ 0.49
MDH1P40925 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
MDH1P40925 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
MDH1P40925 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
MDH1P40925 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MDH1P40925 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.1■□□□□ 0.49
MDH1P40925 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.1■□□□□ 0.49
MDH1P40925 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.1■□□□□ 0.49
MDH1P40925 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MDH1P40925 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MDH1P40925 AC026691.1-201ENST00000602502 2017 ntBASIC18.1■□□□□ 0.49
MDH1P40925 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
MDH1P40925 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.1■□□□□ 0.49
MDH1P40925 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MDH1P40925 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MDH1P40925 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MDH1P40925 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MDH1P40925 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MDH1P40925 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MDH1P40925 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MDH1P40925 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MDH1P40925 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms