Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
APCP25054 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.06■□□□□ 0
APCP25054 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.06■□□□□ 0
APCP25054 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
APCP25054 AC067863.1-201ENST00000494933 530 ntBASIC15.06■□□□□ 0
APCP25054 AC096734.2-201ENST00000562054 433 ntBASIC15.06■□□□□ 0
APCP25054 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.06■□□□□ 0
APCP25054 SPDYE22P-201ENST00000582158 798 ntBASIC15.06■□□□□ 0
APCP25054 AC008667.4-201ENST00000607370 168 ntBASIC15.06■□□□□ 0
APCP25054 AP001059.3-201ENST00000619053 235 ntBASIC15.06■□□□□ 0
APCP25054 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.06■□□□□ 0
APCP25054 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
APCP25054 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.05■□□□□ 0
APCP25054 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
APCP25054 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
APCP25054 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
APCP25054 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.05■□□□□ 0
APCP25054 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.05■□□□□ 0
APCP25054 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.05■□□□□ 0
APCP25054 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.05■□□□□ 0
APCP25054 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.05■□□□□ 0
APCP25054 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.05■□□□□ 0
APCP25054 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.05■□□□□ 0
APCP25054 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APCP25054 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APCP25054 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
APCP25054 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
APCP25054 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.05■□□□□ -0
APCP25054 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.05■□□□□ -0
APCP25054 AC074386.1-202ENST00000463561 864 ntBASIC15.05■□□□□ -0
APCP25054 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.05■□□□□ -0
APCP25054 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.05■□□□□ -0
APCP25054 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.05■□□□□ -0
APCP25054 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APCP25054 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
APCP25054 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APCP25054 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.04■□□□□ -0
APCP25054 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.04■□□□□ -0
APCP25054 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.04■□□□□ -0
APCP25054 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.04■□□□□ -0
APCP25054 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.04■□□□□ -0
APCP25054 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
APCP25054 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.04■□□□□ -0
APCP25054 AC027307.3-201ENST00000594262 1100 ntBASIC15.04■□□□□ -0
APCP25054 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
APCP25054 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.04■□□□□ -0
APCP25054 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.04■□□□□ -0
APCP25054 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.04■□□□□ -0
APCP25054 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.04■□□□□ -0
APCP25054 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.04■□□□□ -0
APCP25054 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.04■□□□□ -0
APCP25054 AL499627.1-201ENST00000569373 2188 ntBASIC15.04■□□□□ -0
APCP25054 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
APCP25054 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 AC009102.3-201ENST00000623118 1491 ntBASIC15.04■□□□□ -0
APCP25054 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APCP25054 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
APCP25054 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.03■□□□□ -0
APCP25054 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
APCP25054 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APCP25054 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
APCP25054 AL596325.1-201ENST00000563991 1082 ntBASIC15.03■□□□□ -0
APCP25054 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.03■□□□□ -0
APCP25054 LINC02560-201ENST00000596379 459 ntBASIC15.03■□□□□ -0
APCP25054 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.03■□□□□ -0
APCP25054 AC132938.6-201ENST00000623828 1655 ntBASIC15.03■□□□□ -0
APCP25054 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.03■□□□□ -0
APCP25054 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.03■□□□□ -0
APCP25054 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.03■□□□□ -0
APCP25054 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.03■□□□□ -0
APCP25054 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.03■□□□□ -0
APCP25054 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.03■□□□□ -0
APCP25054 MIR943-201ENST00000401286 94 ntBASIC15.03■□□□□ -0
APCP25054 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.03■□□□□ -0
APCP25054 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.03■□□□□ -0
APCP25054 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.03■□□□□ -0
APCP25054 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
APCP25054 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
APCP25054 AC132938.5-201ENST00000624980 1813 ntBASIC15.03■□□□□ -0
APCP25054 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.03■□□□□ -0
APCP25054 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.03■□□□□ -0
APCP25054 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
APCP25054 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms