Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KRT4P19013 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT4P19013 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT4P19013 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT4P19013 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT4P19013 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 TNRC18P3-201ENST00000441896 2691 ntBASIC18.12■□□□□ 0.49
KRT4P19013 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT4P19013 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT4P19013 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT4P19013 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT4P19013 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
KRT4P19013 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT4P19013 HLA-L-209ENST00000420110 1011 ntBASIC18.11■□□□□ 0.49
KRT4P19013 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT4P19013 MFAP1P1-201ENST00000442257 1255 ntBASIC18.11■□□□□ 0.49
KRT4P19013 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT4P19013 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT4P19013 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
KRT4P19013 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT4P19013 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
KRT4P19013 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 HOXB1-202ENST00000577092 1414 ntBASIC18.1■□□□□ 0.49
KRT4P19013 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
KRT4P19013 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT4P19013 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
KRT4P19013 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.1■□□□□ 0.49
KRT4P19013 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 C1QBPP2-201ENST00000528754 825 ntBASIC18.1■□□□□ 0.49
KRT4P19013 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.1■□□□□ 0.49
KRT4P19013 RARRES2P10-201ENST00000564312 460 ntBASIC18.1■□□□□ 0.49
KRT4P19013 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 CROCCP2-202ENST00000412962 2773 ntBASIC18.1■□□□□ 0.49
KRT4P19013 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
KRT4P19013 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT4P19013 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT4P19013 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT4P19013 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT4P19013 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT4P19013 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT4P19013 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
KRT4P19013 AL138688.1-201ENST00000624851 1594 ntBASIC18.09■□□□□ 0.49
KRT4P19013 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT4P19013 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT4P19013 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms