Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN1P18031 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PTPN1P18031 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
PTPN1P18031 MINOS1P3-201ENST00000457048 203 ntBASIC19.07■□□□□ 0.64
PTPN1P18031 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PTPN1P18031 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.07■□□□□ 0.64
PTPN1P18031 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN1P18031 KRT126P-201ENST00000549467 1181 ntBASIC19.07■□□□□ 0.64
PTPN1P18031 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.07■□□□□ 0.64
PTPN1P18031 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN1P18031 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.07■□□□□ 0.64
PTPN1P18031 AC005336.2-201ENST00000593183 939 ntBASIC19.07■□□□□ 0.64
PTPN1P18031 AC099336.1-202ENST00000602961 463 ntBASIC19.07■□□□□ 0.64
PTPN1P18031 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN1P18031 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PTPN1P18031 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PTPN1P18031 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN1P18031 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PTPN1P18031 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PTPN1P18031 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN1P18031 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PTPN1P18031 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN1P18031 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PTPN1P18031 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPN1P18031 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN1P18031 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN1P18031 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN1P18031 FOSL1P1-201ENST00000511041 816 ntBASIC19.06■□□□□ 0.64
PTPN1P18031 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN1P18031 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN1P18031 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN1P18031 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN1P18031 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 LETM1P2-201ENST00000597330 2178 ntBASIC19.06■□□□□ 0.64
PTPN1P18031 BICD1-207ENST00000551848 1962 ntBASIC19.06■□□□□ 0.64
PTPN1P18031 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN1P18031 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPN1P18031 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTPN1P18031 AC022898.2-201ENST00000616822 1312 ntBASIC19.05■□□□□ 0.64
PTPN1P18031 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PTPN1P18031 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PTPN1P18031 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PTPN1P18031 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN1P18031 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN1P18031 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.05■□□□□ 0.64
PTPN1P18031 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.05■□□□□ 0.64
PTPN1P18031 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
PTPN1P18031 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PTPN1P18031 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PTPN1P18031 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN1P18031 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN1P18031 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PTPN1P18031 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN1P18031 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PTPN1P18031 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN1P18031 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN1P18031 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN1P18031 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN1P18031 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms