Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TOP2AP11388 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TOP2AP11388 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TOP2AP11388 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC31.34■■■□□ 2.61
TOP2AP11388 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TOP2AP11388 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC31.34■■■□□ 2.61
TOP2AP11388 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC31.34■■■□□ 2.61
TOP2AP11388 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC31.34■■■□□ 2.61
TOP2AP11388 S100A2-206ENST00000497140 697 ntTSL 2 BASIC31.34■■■□□ 2.61
TOP2AP11388 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC31.34■■■□□ 2.61
TOP2AP11388 CFL1-202ENST00000524553 860 ntTSL 2 BASIC31.34■■■□□ 2.61
TOP2AP11388 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC31.34■■■□□ 2.61
TOP2AP11388 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
TOP2AP11388 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TOP2AP11388 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
TOP2AP11388 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TOP2AP11388 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC31.33■■■□□ 2.61
TOP2AP11388 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
TOP2AP11388 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC31.33■■■□□ 2.61
TOP2AP11388 MKNK2P1-201ENST00000437526 628 ntBASIC31.33■■■□□ 2.61
TOP2AP11388 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TOP2AP11388 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
TOP2AP11388 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC31.32■■■□□ 2.6
TOP2AP11388 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC31.32■■■□□ 2.6
TOP2AP11388 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC31.32■■■□□ 2.6
TOP2AP11388 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TOP2AP11388 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC31.32■■■□□ 2.6
TOP2AP11388 RPS15-207ENST00000591032 550 ntTSL 3 BASIC31.32■■■□□ 2.6
TOP2AP11388 C20orf181-201ENST00000623918 480 ntBASIC31.32■■■□□ 2.6
TOP2AP11388 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC31.32■■■□□ 2.6
TOP2AP11388 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC31.32■■■□□ 2.6
TOP2AP11388 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TOP2AP11388 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TOP2AP11388 SP100-208ENST00000427101 1922 ntTSL 2 BASIC31.32■■■□□ 2.6
TOP2AP11388 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TOP2AP11388 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TOP2AP11388 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC31.31■■■□□ 2.6
TOP2AP11388 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC31.31■■■□□ 2.6
TOP2AP11388 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TOP2AP11388 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TOP2AP11388 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC31.31■■■□□ 2.6
TOP2AP11388 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
TOP2AP11388 CRYGEP-201ENST00000412192 528 ntBASIC31.31■■■□□ 2.6
TOP2AP11388 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC31.31■■■□□ 2.6
TOP2AP11388 PDPK2P-202ENST00000562415 1191 ntBASIC31.31■■■□□ 2.6
TOP2AP11388 AC005829.1-201ENST00000570002 483 ntBASIC31.31■■■□□ 2.6
TOP2AP11388 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC31.31■■■□□ 2.6
TOP2AP11388 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC31.31■■■□□ 2.6
TOP2AP11388 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
TOP2AP11388 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TOP2AP11388 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
TOP2AP11388 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC31.31■■■□□ 2.6
TOP2AP11388 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
TOP2AP11388 GPR89P-201ENST00000407924 1495 ntBASIC31.31■■■□□ 2.6
TOP2AP11388 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC31.31■■■□□ 2.6
TOP2AP11388 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
TOP2AP11388 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TOP2AP11388 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC31.3■■■□□ 2.6
TOP2AP11388 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC31.3■■■□□ 2.6
TOP2AP11388 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC31.3■■■□□ 2.6
TOP2AP11388 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC31.3■■■□□ 2.6
TOP2AP11388 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
TOP2AP11388 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TOP2AP11388 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TOP2AP11388 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
TOP2AP11388 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC31.3■■■□□ 2.6
TOP2AP11388 PUS1-205ENST00000535067 838 ntTSL 3 BASIC31.3■■■□□ 2.6
TOP2AP11388 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
TOP2AP11388 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC31.3■■■□□ 2.6
TOP2AP11388 AC073130.3-201ENST00000624389 2278 ntBASIC31.3■■■□□ 2.6
TOP2AP11388 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TOP2AP11388 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TOP2AP11388 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOP2AP11388 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TOP2AP11388 POLD4-207ENST00000531239 584 ntTSL 2 BASIC31.29■■■□□ 2.6
TOP2AP11388 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC31.29■■■□□ 2.6
TOP2AP11388 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC31.29■■■□□ 2.6
TOP2AP11388 AL596442.2-201ENST00000610240 980 ntBASIC31.29■■■□□ 2.6
TOP2AP11388 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC31.29■■■□□ 2.6
TOP2AP11388 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC31.29■■■□□ 2.6
TOP2AP11388 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TOP2AP11388 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC31.29■■■□□ 2.6
TOP2AP11388 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC31.29■■■□□ 2.6
TOP2AP11388 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC31.29■■■□□ 2.6
TOP2AP11388 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TOP2AP11388 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOP2AP11388 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC31.29■■■□□ 2.6
TOP2AP11388 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC31.29■■■□□ 2.6
TOP2AP11388 ELL2P1-201ENST00000413990 1906 ntBASIC31.29■■■□□ 2.6
TOP2AP11388 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TOP2AP11388 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
TOP2AP11388 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
TOP2AP11388 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC31.29■■■□□ 2.6
TOP2AP11388 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC31.29■■■□□ 2.6
TOP2AP11388 LINC02084-201ENST00000606069 1096 ntBASIC31.29■■■□□ 2.6
TOP2AP11388 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TOP2AP11388 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TOP2AP11388 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC31.28■■■□□ 2.6
TOP2AP11388 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
TOP2AP11388 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms