Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.16■□□□□ 0.5
SRPRAP08240 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.16■□□□□ 0.5
SRPRAP08240 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SRPRAP08240 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRPRAP08240 AC093677.2-201ENST00000600169 1863 ntBASIC18.16■□□□□ 0.5
SRPRAP08240 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.15■□□□□ 0.5
SRPRAP08240 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.15■□□□□ 0.5
SRPRAP08240 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.15■□□□□ 0.5
SRPRAP08240 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SRPRAP08240 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.15■□□□□ 0.5
SRPRAP08240 RBM17P3-201ENST00000417687 1192 ntBASIC18.15■□□□□ 0.5
SRPRAP08240 AC096633.1-201ENST00000422446 749 ntBASIC18.15■□□□□ 0.5
SRPRAP08240 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 AC009078.2-202ENST00000463353 338 ntBASIC18.15■□□□□ 0.5
SRPRAP08240 AC106795.1-205ENST00000512851 1056 ntBASIC18.15■□□□□ 0.5
SRPRAP08240 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.15■□□□□ 0.5
SRPRAP08240 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.15■□□□□ 0.5
SRPRAP08240 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SRPRAP08240 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.15■□□□□ 0.5
SRPRAP08240 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.15■□□□□ 0.5
SRPRAP08240 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SRPRAP08240 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 AL096828.2-201ENST00000567259 1965 ntBASIC18.15■□□□□ 0.5
SRPRAP08240 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRPRAP08240 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.15■□□□□ 0.5
SRPRAP08240 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SRPRAP08240 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.14■□□□□ 0.49
SRPRAP08240 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.14■□□□□ 0.49
SRPRAP08240 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SRPRAP08240 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.14■□□□□ 0.49
SRPRAP08240 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.14■□□□□ 0.49
SRPRAP08240 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.14■□□□□ 0.49
SRPRAP08240 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.14■□□□□ 0.49
SRPRAP08240 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.14■□□□□ 0.49
SRPRAP08240 FAM220CP-201ENST00000395253 831 ntBASIC18.14■□□□□ 0.49
SRPRAP08240 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.14■□□□□ 0.49
SRPRAP08240 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.14■□□□□ 0.49
SRPRAP08240 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.14■□□□□ 0.49
SRPRAP08240 AC008608.2-201ENST00000606089 416 ntBASIC18.14■□□□□ 0.49
SRPRAP08240 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.14■□□□□ 0.49
SRPRAP08240 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SRPRAP08240 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.14■□□□□ 0.49
SRPRAP08240 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SRPRAP08240 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SRPRAP08240 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRPRAP08240 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.14■□□□□ 0.49
SRPRAP08240 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SRPRAP08240 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRPRAP08240 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRPRAP08240 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.13■□□□□ 0.49
SRPRAP08240 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.13■□□□□ 0.49
SRPRAP08240 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.13■□□□□ 0.49
SRPRAP08240 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.13■□□□□ 0.49
SRPRAP08240 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRPRAP08240 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.13■□□□□ 0.49
SRPRAP08240 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.13■□□□□ 0.49
SRPRAP08240 AC064862.7-201ENST00000604520 867 ntBASIC18.13■□□□□ 0.49
SRPRAP08240 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.13■□□□□ 0.49
SRPRAP08240 AL355877.3-201ENST00000622820 899 ntBASIC18.13■□□□□ 0.49
SRPRAP08240 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRPRAP08240 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRPRAP08240 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRPRAP08240 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms