Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHGBP05060 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.65■■□□□ 1.06
CHGBP05060 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 AC138028.4-201ENST00000564984 1845 ntBASIC21.65■■□□□ 1.06
CHGBP05060 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.65■■□□□ 1.06
CHGBP05060 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 AC074051.2-201ENST00000565115 352 ntBASIC21.65■■□□□ 1.06
CHGBP05060 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.65■■□□□ 1.06
CHGBP05060 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.65■■□□□ 1.06
CHGBP05060 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHGBP05060 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.65■■□□□ 1.06
CHGBP05060 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHGBP05060 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CHGBP05060 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHGBP05060 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHGBP05060 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHGBP05060 NOC2LP1-202ENST00000452600 2235 ntBASIC21.64■■□□□ 1.06
CHGBP05060 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.64■■□□□ 1.06
CHGBP05060 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHGBP05060 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHGBP05060 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHGBP05060 KRT17P6-201ENST00000453795 1220 ntBASIC21.64■■□□□ 1.05
CHGBP05060 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.64■■□□□ 1.05
CHGBP05060 UNC93B7-201ENST00000509439 705 ntBASIC21.64■■□□□ 1.05
CHGBP05060 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CHGBP05060 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHGBP05060 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHGBP05060 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHGBP05060 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHGBP05060 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHGBP05060 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHGBP05060 NSUN5P1-202ENST00000421140 1535 ntBASIC21.64■■□□□ 1.05
CHGBP05060 NSUN5P2-203ENST00000457352 1529 ntBASIC21.64■■□□□ 1.05
CHGBP05060 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHGBP05060 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHGBP05060 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.64■■□□□ 1.05
CHGBP05060 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.63■■□□□ 1.05
CHGBP05060 AC067852.2-201ENST00000590513 2313 ntBASIC21.63■■□□□ 1.05
CHGBP05060 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.63■■□□□ 1.05
CHGBP05060 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.63■■□□□ 1.05
CHGBP05060 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.63■■□□□ 1.05
CHGBP05060 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CHGBP05060 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.63■■□□□ 1.05
CHGBP05060 DUTP2-201ENST00000519164 463 ntBASIC21.63■■□□□ 1.05
CHGBP05060 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 BNIP3P18-201ENST00000593976 575 ntBASIC21.63■■□□□ 1.05
CHGBP05060 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.63■■□□□ 1.05
CHGBP05060 AL732292.2-201ENST00000609649 430 ntBASIC21.63■■□□□ 1.05
CHGBP05060 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CHGBP05060 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHGBP05060 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.63■■□□□ 1.05
CHGBP05060 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.62■■□□□ 1.05
CHGBP05060 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.62■■□□□ 1.05
CHGBP05060 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CHGBP05060 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.62■■□□□ 1.05
CHGBP05060 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.62■■□□□ 1.05
CHGBP05060 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.62■■□□□ 1.05
CHGBP05060 FOSL1P1-201ENST00000511041 816 ntBASIC21.62■■□□□ 1.05
CHGBP05060 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.62■■□□□ 1.05
CHGBP05060 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.62■■□□□ 1.05
CHGBP05060 AC008687.5-201ENST00000593746 558 ntBASIC21.62■■□□□ 1.05
CHGBP05060 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
CHGBP05060 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CHGBP05060 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGBP05060 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.61■■□□□ 1.05
CHGBP05060 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGBP05060 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms